J3_7PZY_022
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- AGAG*CAG*UCGAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_022 not in the Motif Atlas
- Homologous match to J3_8C3A_035
- Geometric discrepancy: 0.0727
- The information below is about J3_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_00811.1
- Basepair signature
- cWW-tWW-F-cWW-F-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PZY|1|A|A|745
7PZY|1|A|G|746
7PZY|1|A|A|747
7PZY|1|A|G|748
*
7PZY|1|A|C|758
7PZY|1|A|A|759
7PZY|1|A|G|760
*
7PZY|1|A|U|769
7PZY|1|A|C|770
7PZY|1|A|G|771
7PZY|1|A|A|772
7PZY|1|A|A|773
7PZY|1|A|U|774
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain K
- Ribosomal 40S subunit protein S9B
- Chain Z
- 40S ribosomal protein S24
Coloring options: