J3_7Q0P_014
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- AGCU*ACGUUCUAGCAUUAAG*CGAU
- Length
- 24 nucleotides
- Bulged bases
- 7Q0P|1|1|G|2527, 7Q0P|1|1|U|2528, 7Q0P|1|1|U|2529, 7Q0P|1|1|A|2532, 7Q0P|1|1|U|2536, 7Q0P|1|1|U|2537
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0P_014 not in the Motif Atlas
- Homologous match to J3_8C3A_009
- Geometric discrepancy: 0.0667
- The information below is about J3_8C3A_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02167.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
7Q0P|1|1|A|2507
7Q0P|1|1|G|2508
7Q0P|1|1|C|2509
7Q0P|1|1|U|2510
*
7Q0P|1|1|A|2525
7Q0P|1|1|C|2526
7Q0P|1|1|G|2527
7Q0P|1|1|U|2528
7Q0P|1|1|U|2529
7Q0P|1|1|C|2530
7Q0P|1|1|U|2531
7Q0P|1|1|A|2532
7Q0P|1|1|G|2533
7Q0P|1|1|C|2534
7Q0P|1|1|A|2535
7Q0P|1|1|U|2536
7Q0P|1|1|U|2537
7Q0P|1|1|A|2538
7Q0P|1|1|A|2539
7Q0P|1|1|G|2540
*
7Q0P|1|1|C|2550
7Q0P|1|1|G|2551
7Q0P|1|1|A|2552
7Q0P|1|1|U|2553
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L27
- Chain AD
- Ribosomal 60S subunit protein L30
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain p
- 60S ribosomal protein L8
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