J3_7Q7Z_003
3D structure
- PDB id
- 7Q7Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the methyltransferase-ribozyme 1 (with 1-benzylamine-adenosine)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.26 Å
Loop
- Sequence
- G(9SI)G*CUGACCG*CUAGACAUAC
- Length
- 20 nucleotides
- Bulged bases
- 7Q7Z|1|C|U|36
- QA status
- Modified nucleotides: 9SI
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q7Z_003 not in the Motif Atlas
- Geometric match to J3_7V9E_002
- Geometric discrepancy: 0.1272
- The information below is about J3_7V9E_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92440.1
- Basepair signature
- cWW-tSW-cWS-cWW-F-F-cSW-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7Q7Z|1|A|G|6
7Q7Z|1|A|9SI|7
7Q7Z|1|A|G|8
*
7Q7Z|1|B|C|8
7Q7Z|1|B|U|9
7Q7Z|1|B|G|10
7Q7Z|1|B|A|11
7Q7Z|1|B|C|12
7Q7Z|1|B|C|13
7Q7Z|1|B|G|14
*
7Q7Z|1|C|C|35
7Q7Z|1|C|U|36
7Q7Z|1|C|A|37
7Q7Z|1|C|G|38
7Q7Z|1|C|A|39
7Q7Z|1|C|C|40
7Q7Z|1|C|A|41
7Q7Z|1|C|U|42
7Q7Z|1|C|A|43
7Q7Z|1|C|C|44
Current chains
- Chain A
- RNA 1
- Chain B
- RNA 2
- Chain C
- RNA 3
Nearby chains
- Chain E
- RNA 2
- Chain F
- RNA 3
Coloring options: