J3_7Q82_003

3D structure

PDB id

7Q82 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the methyltransferase-ribozyme 1, Thallium derivative (with 1-methyl-adenosine)

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

G(1MA)G*CUGACCGACCC*GACAACUAGACAUAC

Length

29 nucleotides

Bulged bases

7Q82|1|C|U|36

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_01470.1

Basepair signature

cWW-F-F-F-F-F-F-tHW-cWW-cWW-tSW-F-cSW-F-F-F-F-cWW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7Q82|1|A|G|6
7Q82|1|A|1MA|7
7Q82|1|A|G|8
*
7Q82|1|B|C|8
7Q82|1|B|U|9
7Q82|1|B|G|10
7Q82|1|B|A|11
7Q82|1|B|C|12
7Q82|1|B|C|13
7Q82|1|B|G|14
7Q82|1|B|A|15
7Q82|1|B|C|16
7Q82|1|B|C|17
7Q82|1|B|C|18
*
7Q82|1|C|G|30
7Q82|1|C|A|31
7Q82|1|C|C|32
7Q82|1|C|A|33
7Q82|1|C|A|34
7Q82|1|C|C|35
7Q82|1|C|U|36
7Q82|1|C|A|37
7Q82|1|C|G|38
7Q82|1|C|A|39
7Q82|1|C|C|40
7Q82|1|C|A|41
7Q82|1|C|U|42
7Q82|1|C|A|43
7Q82|1|C|C|44

Current chains

Chain A

RNA 1

Chain B

RNA 2

Chain C

RNA 3

Nearby chains