J3_7QGN_012
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- UAU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 7QGN|1|0|U|1183
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QGN_012 not in the Motif Atlas
- Homologous match to J3_5J7L_010
- Geometric discrepancy: 0.1468
- The information below is about J3_5J7L_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.4
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7QGN|1|0|U|1116
7QGN|1|0|A|1117
7QGN|1|0|U|1118
*
7QGN|1|0|A|1155
7QGN|1|0|G|1156
7QGN|1|0|A|1157
7QGN|1|0|C|1158
*
7QGN|1|0|G|1181
7QGN|1|0|G|1182
7QGN|1|0|U|1183
7QGN|1|0|G|1184
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain 1
- 30S ribosomal protein S2
- Chain 6
- Ribosomal protein S7
- Chain 8
- 30S ribosomal protein S9
- Chain 9
- 30S ribosomal protein S10
- Chain G
- 30S ribosomal protein S14
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