J3_7QGN_030

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7QGN|1|0|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGN_030 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.111

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7QGN|1|0|C|990
7QGN|1|0|U|991
7QGN|1|0|U|992
7QGN|1|0|G|993
7QGN|1|0|A|994
7QGN|1|0|C|995
7QGN|1|0|A|996
7QGN|1|0|U|997
*
7QGN|1|0|A|1044
7QGN|1|0|C|1045
7QGN|1|0|A|1046
7QGN|1|0|G|1047
*
7QGN|1|0|C|1210
7QGN|1|0|U|1211
7QGN|1|0|U|1212
7QGN|1|0|A|1213
7QGN|1|0|C|1214
7QGN|1|0|G|1215

Current chains

Chain 0

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S14