J3_7QI4_008

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

7QI4|1|AA|A|688, 7QI4|1|AA|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QI4|1|AA|G|687
7QI4|1|AA|A|688
7QI4|1|AA|U|689
7QI4|1|AA|U|690
*
7QI4|1|AA|A|823
7QI4|1|AA|U|824
7QI4|1|AA|U|825
7QI4|1|AA|A|826
7QI4|1|AA|A|827
7QI4|1|AA|C|828
7QI4|1|AA|C|829
7QI4|1|AA|U|830
*
7QI4|1|AA|A|856
7QI4|1|AA|G|857
7QI4|1|AA|C|858

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial