J3_7QI4_016
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- AAAAUUUAACACCCAU*AUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 59 nucleotides
- Bulged bases
- 7QI4|1|A|A|2154, 7QI4|1|A|U|2159, 7QI4|1|A|C|2219, 7QI4|1|A|C|2221, 7QI4|1|A|C|2224, 7QI4|1|A|U|2233, 7QI4|1|A|C|2234, 7QI4|1|A|A|2241, 7QI4|1|A|U|2242, 7QI4|1|A|A|2243, 7QI4|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QI4|1|A|A|2153
7QI4|1|A|A|2154
7QI4|1|A|A|2155
7QI4|1|A|A|2156
7QI4|1|A|U|2157
7QI4|1|A|U|2158
7QI4|1|A|U|2159
7QI4|1|A|A|2160
7QI4|1|A|A|2161
7QI4|1|A|C|2162
7QI4|1|A|A|2163
7QI4|1|A|C|2164
7QI4|1|A|C|2165
7QI4|1|A|C|2166
7QI4|1|A|A|2167
7QI4|1|A|U|2168
*
7QI4|1|A|A|2192
7QI4|1|A|U|2193
7QI4|1|A|U|2194
7QI4|1|A|A|2195
7QI4|1|A|A|2196
7QI4|1|A|G|2197
*
7QI4|1|A|C|2212
7QI4|1|A|A|2213
7QI4|1|A|A|2214
7QI4|1|A|C|2215
7QI4|1|A|A|2216
7QI4|1|A|C|2217
7QI4|1|A|C|2218
7QI4|1|A|C|2219
7QI4|1|A|A|2220
7QI4|1|A|C|2221
7QI4|1|A|U|2222
7QI4|1|A|A|2223
7QI4|1|A|C|2224
7QI4|1|A|C|2225
7QI4|1|A|U|2226
7QI4|1|A|A|2227
7QI4|1|A|A|2228
7QI4|1|A|A|2229
7QI4|1|A|A|2230
7QI4|1|A|A|2231
7QI4|1|A|A|2232
7QI4|1|A|U|2233
7QI4|1|A|C|2234
7QI4|1|A|C|2235
7QI4|1|A|C|2236
7QI4|1|A|A|2237
7QI4|1|A|A|2238
7QI4|1|A|A|2239
7QI4|1|A|C|2240
7QI4|1|A|A|2241
7QI4|1|A|U|2242
7QI4|1|A|A|2243
7QI4|1|A|U|2244
7QI4|1|A|A|2245
7QI4|1|A|A|2246
7QI4|1|A|C|2247
7QI4|1|A|U|2248
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain k
- 39S ribosomal protein L53, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: