J3_7QI6_013

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CAUUU*AAACUACGAUAG*UCGAAGGUG

Length

26 nucleotides

Bulged bases

7QI6|1|AA|U|1369, 7QI6|1|AA|C|1385, 7QI6|1|AA|U|1386, 7QI6|1|AA|U|1391

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QI6|1|AA|C|1366
7QI6|1|AA|A|1367
7QI6|1|AA|U|1368
7QI6|1|AA|U|1369
7QI6|1|AA|U|1370
*
7QI6|1|AA|A|1382
7QI6|1|AA|A|1383
7QI6|1|AA|A|1384
7QI6|1|AA|C|1385
7QI6|1|AA|U|1386
7QI6|1|AA|A|1387
7QI6|1|AA|C|1388
7QI6|1|AA|G|1389
7QI6|1|AA|A|1390
7QI6|1|AA|U|1391
7QI6|1|AA|A|1392
7QI6|1|AA|G|1393
*
7QI6|1|AA|U|1413
7QI6|1|AA|C|1414
7QI6|1|AA|G|1415
7QI6|1|AA|A|1416
7QI6|1|AA|A|1417
7QI6|1|AA|G|1418
7QI6|1|AA|G|1419
7QI6|1|AA|U|1420
7QI6|1|AA|G|1421

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial