J3_7QV1_004

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

7QV1|1|V|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV1_004 not in the Motif Atlas

Homologous match to J3_7RQB_003

Geometric discrepancy: 0.2255

The information below is about J3_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97921.1

Basepair signature

cWW-F-F-tSH-tWH-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7QV1|1|V|C|272
7QV1|1|V|A|273
7QV1|1|V|A|274
7QV1|1|V|A|275
7QV1|1|V|C|276
*
7QV1|1|V|G|295
7QV1|1|V|G|296
7QV1|1|V|G|297
7QV1|1|V|U|298
7QV1|1|V|U|299
7QV1|1|V|G|300
7QV1|1|V|U|301
7QV1|1|V|A|302
*
7QV1|1|V|U|416
7QV1|1|V|G|417

Current chains

Chain V

23S ribosomal RNA

Nearby chains