J3_7QV1_029

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAAG*CGCCAUAGGA*UGUAG

Length

20 nucleotides

Bulged bases

7QV1|1|V|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV1_029 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.1269

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7QV1|1|V|U|340
7QV1|1|V|G|341
7QV1|1|V|A|342
7QV1|1|V|A|343
7QV1|1|V|G|344
*
7QV1|1|V|C|360
7QV1|1|V|G|361
7QV1|1|V|C|362
7QV1|1|V|C|363
7QV1|1|V|A|364
7QV1|1|V|U|365
7QV1|1|V|A|366
7QV1|1|V|G|367
7QV1|1|V|G|368
7QV1|1|V|A|369
*
7QV1|1|V|U|381
7QV1|1|V|G|382
7QV1|1|V|U|383
7QV1|1|V|A|384
7QV1|1|V|G|385

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24