J3_7R4X_017

3D structure

PDB id

7R4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

U(OMG)GA*UUAAGAG*CAUUA

Length

16 nucleotides

Bulged bases

7R4X|1|2|G|921

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7R4X|1|2|U|682
7R4X|1|2|OMG|683
7R4X|1|2|G|684
7R4X|1|2|A|685
*
7R4X|1|2|U|917
7R4X|1|2|U|918
7R4X|1|2|A|919
7R4X|1|2|A|920
7R4X|1|2|G|921
7R4X|1|2|A|922
7R4X|1|2|G|923
*
7R4X|1|2|C|1019
7R4X|1|2|A|1020
7R4X|1|2|U|1021
7R4X|1|2|U|1022
7R4X|1|2|A|1023

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S7

Chain L

40S ribosomal protein S11

Chain N

40S ribosomal protein S13

Chain W

40S ribosomal protein S15a

Chain X

40S ribosomal protein S23

Chain b

40S ribosomal protein S27