J3_7RQ9_013

3D structure

PDB id

7RQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CACG*CGGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

7RQ9|1|1A|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQ9|1|1A|C|2789
7RQ9|1|1A|A|2790
7RQ9|1|1A|C|2791
7RQ9|1|1A|G|2792
*
7RQ9|1|1A|C|2804
7RQ9|1|1A|G|2805
7RQ9|1|1A|G|2807
7RQ9|1|1A|U|2808
7RQ9|1|1A|A|2809
7RQ9|1|1A|A|2810
7RQ9|1|1A|G|2811
*
7RQ9|1|1A|C|2889
7RQ9|1|1A|G|2891
7RQ9|1|1A|A|2892
7RQ9|1|1A|G|2893
7RQ9|1|1A|G|2894

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1E

50S ribosomal protein L3