J3_7RQ9_043

3D structure

PDB id

7RQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GC*GGAAUCUUC*GAGC

Length

15 nucleotides

Bulged bases

7RQ9|1|2a|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQ9|1|2a|G|46
7RQ9|1|2a|C|47
*
7RQ9|1|2a|G|361
7RQ9|1|2a|G|362
7RQ9|1|2a|A|363
7RQ9|1|2a|A|364
7RQ9|1|2a|U|365
7RQ9|1|2a|C|366
7RQ9|1|2a|U|367
7RQ9|1|2a|U|368
7RQ9|1|2a|C|369
*
7RQ9|1|2a|G|392
7RQ9|1|2a|A|393
7RQ9|1|2a|G|394
7RQ9|1|2a|C|395

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2l

30S ribosomal protein S12

Chain 2p

30S ribosomal protein S16