J3_7RQ9_074

3D structure

PDB id

7RQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CCUUGACAU*ACAG*CUUACGG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQ9|1|2a|C|989
7RQ9|1|2a|C|990
7RQ9|1|2a|U|991
7RQ9|1|2a|U|992
7RQ9|1|2a|G|993
7RQ9|1|2a|A|994
7RQ9|1|2a|C|995
7RQ9|1|2a|A|996
7RQ9|1|2a|U|997
*
7RQ9|1|2a|A|1044
7RQ9|1|2a|C|1045
7RQ9|1|2a|A|1046
7RQ9|1|2a|G|1047
*
7RQ9|1|2a|C|1210
7RQ9|1|2a|U|1211
7RQ9|1|2a|U|1212
7RQ9|1|2a|A|1213
7RQ9|1|2a|C|1214
7RQ9|1|2a|G|1215
7RQ9|1|2a|G|1216

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z

Chain 2s

30S ribosomal protein S19