J3_7RR5_039

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

7RR5|1|C2|U|227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RR5|1|C2|A|213
7RR5|1|C2|G|214
7RR5|1|C2|A|215
7RR5|1|C2|U|216
7RR5|1|C2|A|217
7RR5|1|C2|A|218
7RR5|1|C2|A|219
7RR5|1|C2|A|220
7RR5|1|C2|A|221
7RR5|1|C2|A|222
7RR5|1|C2|U|223
7RR5|1|C2|C|224
7RR5|1|C2|A|225
7RR5|1|C2|A|226
7RR5|1|C2|U|227
7RR5|1|C2|G|228
*
7RR5|1|C2|C|237
7RR5|1|C2|U|238
7RR5|1|C2|C|239
7RR5|1|C2|U|240
7RR5|1|C2|U|241
7RR5|1|C2|U|242
7RR5|1|C2|G|243
*
7RR5|1|C2|C|250
7RR5|1|C2|A|251
7RR5|1|C2|U|252

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SG

40S ribosomal protein S6

Chain SL

40S ribosomal protein S11-B