J3_7RYH_003

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CGAUCUA*UAG*CAAG

Length

14 nucleotides

Bulged bases

7RYH|1|A|U|684, 7RYH|1|A|A|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7RYH_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0763

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7RYH|1|A|C|681
7RYH|1|A|G|682
7RYH|1|A|A|683
7RYH|1|A|U|684
7RYH|1|A|C|685
7RYH|1|A|U|686
7RYH|1|A|A|687
*
7RYH|1|A|U|771
7RYH|1|A|A|772
7RYH|1|A|G|773
*
7RYH|1|A|C|789
7RYH|1|A|A|790
7RYH|1|A|A|791
7RYH|1|A|G|792

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2