J3_7RYH_020

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7RYH_020 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1529

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7RYH|1|a|C|987
7RYH|1|a|U|988
7RYH|1|a|U|989
7RYH|1|a|G|990
*
7RYH|1|a|C|1042
7RYH|1|a|A|1043
7RYH|1|a|G|1044
*
7RYH|1|a|C|1207
7RYH|1|a|U|1208
7RYH|1|a|U|1209
7RYH|1|a|A|1210
7RYH|1|a|C|1211
7RYH|1|a|G|1212

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14