J3_7RYH_028

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GGAAC*GAACGUAGAG*CGUAC

Length

20 nucleotides

Bulged bases

7RYH|1|A|U|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7RYH_028 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0934

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7RYH|1|A|G|299
7RYH|1|A|G|300
7RYH|1|A|A|301
7RYH|1|A|A|302
7RYH|1|A|C|303
*
7RYH|1|A|G|318
7RYH|1|A|A|319
7RYH|1|A|A|320
7RYH|1|A|C|321
7RYH|1|A|G|322
7RYH|1|A|U|323
7RYH|1|A|A|324
7RYH|1|A|G|325
7RYH|1|A|A|326
7RYH|1|A|G|327
*
7RYH|1|A|C|339
7RYH|1|A|G|340
7RYH|1|A|U|341
7RYH|1|A|A|342
7RYH|1|A|C|343

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain T

50S ribosomal protein L24