J3_7SAE_003

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

7SAE|1|A|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_003 not in the Motif Atlas

Homologous match to J3_7RQB_003

Geometric discrepancy: 0.1658

The information below is about J3_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97921.1

Basepair signature

cWW-F-F-tSH-tWH-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7SAE|1|A|C|272
7SAE|1|A|A|273
7SAE|1|A|A|274
7SAE|1|A|A|275
7SAE|1|A|C|276
*
7SAE|1|A|G|295
7SAE|1|A|G|296
7SAE|1|A|G|297
7SAE|1|A|U|298
7SAE|1|A|U|299
7SAE|1|A|G|300
7SAE|1|A|U|301
7SAE|1|A|A|302
*
7SAE|1|A|U|416
7SAE|1|A|G|417

Current chains

Chain A

RNA (2434-MER)

Nearby chains