J3_7SAE_008

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG*CUAACC*GAGACAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_008 not in the Motif Atlas

Homologous match to J3_4WF9_007

Geometric discrepancy: 0.172

The information below is about J3_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_07703.1

Basepair signature

cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F

Number of instances in this motif group

2

Unit IDs

7SAE|1|A|U|2120
7SAE|1|A|U|2121
7SAE|1|A|G|2122
*
7SAE|1|A|C|2225
7SAE|1|A|U|2226
7SAE|1|A|A|2227
7SAE|1|A|A|2228
7SAE|1|A|C|2229
7SAE|1|A|C|2230
*
7SAE|1|A|G|2251
7SAE|1|A|A|2252
7SAE|1|A|G|2253
7SAE|1|A|A|2254
7SAE|1|A|C|2255
7SAE|1|A|A|2256
7SAE|1|A|G|2257

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain C

50S ribosomal protein L2