J3_7SFR_015
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCCACAG*CGC*GACAC
- Length
- 15 nucleotides
- Bulged bases
- 7SFR|1|B|C|13, 7SFR|1|B|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_015 not in the Motif Atlas
- Homologous match to J3_5J7L_049
- Geometric discrepancy: 0.1551
- The information below is about J3_5J7L_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89095.1
- Basepair signature
- cWW-F-F-F-tHS-F-cWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
7SFR|1|B|G|9
7SFR|1|B|C|10
7SFR|1|B|C|11
7SFR|1|B|A|12
7SFR|1|B|C|13
7SFR|1|B|A|14
7SFR|1|B|G|15
*
7SFR|1|B|C|67
7SFR|1|B|G|68
7SFR|1|B|C|69
*
7SFR|1|B|G|102
7SFR|1|B|A|103
7SFR|1|B|C|104
7SFR|1|B|A|105
7SFR|1|B|C|106
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain O
- 50S ribosomal protein L18
- Chain V
- 50S ribosomal protein L25
- Chain W
- 50S ribosomal protein L27
Coloring options: