J3_7SFR_020
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGGA*UAC*GGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_020 not in the Motif Atlas
- Homologous match to J3_5J7L_005
- Geometric discrepancy: 0.1325
- The information below is about J3_5J7L_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7SFR|1|a|C|936
7SFR|1|a|G|937
7SFR|1|a|G|938
7SFR|1|a|A|939
*
7SFR|1|a|U|1227
7SFR|1|a|A|1228
7SFR|1|a|C|1229
*
7SFR|1|a|G|1329
7SFR|1|a|G|1330
7SFR|1|a|A|1331
7SFR|1|a|G|1332
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain m
- 30S ribosomal protein S13
Coloring options: