J3_7SFR_032
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCC*GAUUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 7SFR|1|A|U|2628, 7SFR|1|A|A|2664
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_032 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.0899
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7SFR|1|A|G|2520
7SFR|1|A|C|2521
7SFR|1|A|C|2522
*
7SFR|1|A|G|2622
7SFR|1|A|A|2623
7SFR|1|A|U|2624
7SFR|1|A|U|2625
7SFR|1|A|A|2626
7SFR|1|A|G|2627
7SFR|1|A|U|2628
7SFR|1|A|G|2629
7SFR|1|A|A|2630
7SFR|1|A|U|2631
7SFR|1|A|C|2632
7SFR|1|A|C|2633
*
7SFR|1|A|G|2659
7SFR|1|A|C|2660
7SFR|1|A|U|2661
7SFR|1|A|C|2662
7SFR|1|A|A|2663
7SFR|1|A|A|2664
7SFR|1|A|C|2665
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
Coloring options: