J3_7SFR_043
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 7SFR|1|a|U|1175
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_043 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.2516
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7SFR|1|a|U|1107
7SFR|1|a|G|1108
7SFR|1|a|U|1109
*
7SFR|1|a|A|1147
7SFR|1|a|G|1148
7SFR|1|a|A|1149
7SFR|1|a|C|1150
7SFR|1|a|U|1151
7SFR|1|a|G|1152
7SFR|1|a|C|1153
*
7SFR|1|a|G|1167
7SFR|1|a|A|1168
7SFR|1|a|G|1169
7SFR|1|a|G|1170
7SFR|1|a|A|1171
7SFR|1|a|A|1172
7SFR|1|a|G|1173
7SFR|1|a|G|1174
7SFR|1|a|U|1175
7SFR|1|a|G|1176
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: