J3_7SS9_024

3D structure

PDB id

7SS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G partially dissociated (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAUC*GAGAC*GGUG

Length

13 nucleotides

Bulged bases

7SS9|1|3|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SS9|1|3|U|1116
7SS9|1|3|A|1117
7SS9|1|3|U|1118
7SS9|1|3|C|1119
*
7SS9|1|3|G|1154
7SS9|1|3|A|1155
7SS9|1|3|G|1156
7SS9|1|3|A|1157
7SS9|1|3|C|1158
*
7SS9|1|3|G|1181
7SS9|1|3|G|1182
7SS9|1|3|U|1183
7SS9|1|3|G|1184

Current chains

Chain 3

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S2

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14