J3_7SS9_027
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCCUG*CGAUAGUGAACCAGUAC*GGAAAGG
- Length
- 29 nucleotides
- Bulged bases
- 7SS9|1|1|U|34, 7SS9|1|1|U|448, 7SS9|1|1|C|456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SS9|1|1|C|31
7SS9|1|1|C|32
7SS9|1|1|C|33
7SS9|1|1|U|34
7SS9|1|1|G|35
*
7SS9|1|1|C|445
7SS9|1|1|G|446
7SS9|1|1|A|447
7SS9|1|1|U|448
7SS9|1|1|A|449
7SS9|1|1|G|450
7SS9|1|1|U|451
7SS9|1|1|G|452
7SS9|1|1|A|453
7SS9|1|1|A|454
7SS9|1|1|C|455
7SS9|1|1|C|456
7SS9|1|1|A|457
7SS9|1|1|G|458
7SS9|1|1|U|459
7SS9|1|1|A|460
7SS9|1|1|C|461
*
7SS9|1|1|G|468
7SS9|1|1|G|469
7SS9|1|1|A|470
7SS9|1|1|A|471
7SS9|1|1|A|472
7SS9|1|1|G|473
7SS9|1|1|G|474
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
- Chain d
- 50S ribosomal protein L4
- Chain q
- 50S ribosomal protein L20
- Chain t
- 50S ribosomal protein L23
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