J3_7SSD_005

3D structure

PDB id

7SSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid translocation intermediate with EF-G bound with GDP (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAUG*CAUUUAAAG*CAC

Length

17 nucleotides

Bulged bases

7SSD|1|1|A|1084

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSD|1|1|G|1055
7SSD|1|1|G|1056
7SSD|1|1|A|1057
7SSD|1|1|U|1058
7SSD|1|1|G|1059
*
7SSD|1|1|C|1079
7SSD|1|1|A|1080
7SSD|1|1|U|1081
7SSD|1|1|U|1082
7SSD|1|1|U|1083
7SSD|1|1|A|1084
7SSD|1|1|A|1085
7SSD|1|1|A|1086
7SSD|1|1|G|1087
*
7SSD|1|1|C|1102
7SSD|1|1|A|1103
7SSD|1|1|C|1104

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain i

50S ribosomal protein L11