J3_7SSL_023

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUG*UGUUG*CGCAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|3|G|1072
7SSL|1|3|U|1073
7SSL|1|3|G|1074
*
7SSL|1|3|U|1083
7SSL|1|3|G|1084
7SSL|1|3|U|1085
7SSL|1|3|U|1086
7SSL|1|3|G|1087
*
7SSL|1|3|C|1098
7SSL|1|3|G|1099
7SSL|1|3|C|1100
7SSL|1|3|A|1101
7SSL|1|3|A|1102
7SSL|1|3|C|1103

Current chains

Chain 3

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S2

Chain H

30S ribosomal protein S3

Chain J

30S ribosomal protein S5

Chain Z

30S ribosomal protein S21