J3_7SSL_029

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAUCUAG*CUGG*CAAA

Length

16 nucleotides

Bulged bases

7SSL|1|1|U|686, 7SSL|1|1|A|792, 7SSL|1|1|A|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|1|U|683
7SSL|1|1|G|684
7SSL|1|1|A|685
7SSL|1|1|U|686
7SSL|1|1|C|687
7SSL|1|1|U|688
7SSL|1|1|A|689
7SSL|1|1|G|690
*
7SSL|1|1|C|772
7SSL|1|1|U|773
7SSL|1|1|G|774
7SSL|1|1|G|775
*
7SSL|1|1|C|791
7SSL|1|1|A|792
7SSL|1|1|A|793
7SSL|1|1|A|794

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain b

50S ribosomal protein L2