J3_7SSL_031

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCGACC*GAAACA*UGUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|1|G|1343
7SSL|1|1|U|1344
7SSL|1|1|C|1345
7SSL|1|1|G|1346
7SSL|1|1|A|1347
7SSL|1|1|C|1348
7SSL|1|1|C|1349
*
7SSL|1|1|G|1382
7SSL|1|1|A|1383
7SSL|1|1|A|1384
7SSL|1|1|A|1385
7SSL|1|1|C|1386
7SSL|1|1|A|1387
*
7SSL|1|1|U|1400
7SSL|1|1|G|1401
7SSL|1|1|U|1402
7SSL|1|1|A|1403
7SSL|1|1|C|1404

Current chains

Chain 1

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23