J3_7SSL_035

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCUAAC*GGGGAAUAUUG*CAGC

Length

22 nucleotides

Bulged bases

7SSL|1|3|C|48, 7SSL|1|3|A|51, 7SSL|1|3|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|3|G|46
7SSL|1|3|C|47
7SSL|1|3|C|48
7SSL|1|3|U|49
7SSL|1|3|A|50
7SSL|1|3|A|51
7SSL|1|3|C|52
*
7SSL|1|3|G|359
7SSL|1|3|G|360
7SSL|1|3|G|361
7SSL|1|3|G|362
7SSL|1|3|A|363
7SSL|1|3|A|364
7SSL|1|3|U|365
7SSL|1|3|A|366
7SSL|1|3|U|367
7SSL|1|3|U|368
7SSL|1|3|G|369
*
7SSL|1|3|C|392
7SSL|1|3|A|393
7SSL|1|3|G|394
7SSL|1|3|C|395

Current chains

Chain 3

16S rRNA

Nearby chains

Chain 8

Elongation factor G

Chain Q

30S ribosomal protein S12

Chain U

30S ribosomal protein S16