3D structure

PDB id
7SSL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GCCUAAC*GGGGAAUAUUG*CAGC
Length
22 nucleotides
Bulged bases
7SSL|1|3|C|48, 7SSL|1|3|A|51, 7SSL|1|3|U|368
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSL|1|3|G|46
7SSL|1|3|C|47
7SSL|1|3|C|48
7SSL|1|3|U|49
7SSL|1|3|A|50
7SSL|1|3|A|51
7SSL|1|3|C|52
*
7SSL|1|3|G|359
7SSL|1|3|G|360
7SSL|1|3|G|361
7SSL|1|3|G|362
7SSL|1|3|A|363
7SSL|1|3|A|364
7SSL|1|3|U|365
7SSL|1|3|A|366
7SSL|1|3|U|367
7SSL|1|3|U|368
7SSL|1|3|G|369
*
7SSL|1|3|C|392
7SSL|1|3|A|393
7SSL|1|3|G|394
7SSL|1|3|C|395

Current chains

Chain 3
16S rRNA

Nearby chains

Chain 8
Elongation factor G
Chain Q
30S ribosomal protein S12
Chain U
30S ribosomal protein S16

Coloring options:

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