J3_7SSL_036
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGUU*AGCUUGA*UGACG
- Length
- 17 nucleotides
- Bulged bases
- 7SSL|1|3|U|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SSL_036 not in the Motif Atlas
- Homologous match to J3_6CZR_060
- Geometric discrepancy: 0.2072
- The information below is about J3_6CZR_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_72319.1
- Basepair signature
- cWW-F-F-F-F-tWH-F-F-cWW-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7SSL|1|3|C|586
7SSL|1|3|G|587
7SSL|1|3|G|588
7SSL|1|3|U|589
7SSL|1|3|U|590
*
7SSL|1|3|A|649
7SSL|1|3|G|650
7SSL|1|3|C|651
7SSL|1|3|U|652
7SSL|1|3|U|653
7SSL|1|3|G|654
7SSL|1|3|A|655
*
7SSL|1|3|U|751
7SSL|1|3|G|752
7SSL|1|3|A|753
7SSL|1|3|C|754
7SSL|1|3|G|755
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
- Chain V
- 30S ribosomal protein S17
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