3D structure

PDB id
7SSL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UAUC*GAGACUGC*GAGGAAGGUG
Length
22 nucleotides
Bulged bases
7SSL|1|3|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSL|1|3|U|1116
7SSL|1|3|A|1117
7SSL|1|3|U|1118
7SSL|1|3|C|1119
*
7SSL|1|3|G|1154
7SSL|1|3|A|1155
7SSL|1|3|G|1156
7SSL|1|3|A|1157
7SSL|1|3|C|1158
7SSL|1|3|U|1159
7SSL|1|3|G|1160
7SSL|1|3|C|1161
*
7SSL|1|3|G|1175
7SSL|1|3|A|1176
7SSL|1|3|G|1177
7SSL|1|3|G|1178
7SSL|1|3|A|1179
7SSL|1|3|A|1180
7SSL|1|3|G|1181
7SSL|1|3|G|1182
7SSL|1|3|U|1183
7SSL|1|3|G|1184

Current chains

Chain 3
16S rRNA

Nearby chains

Chain G
30S ribosomal protein S2
Chain N
30S ribosomal protein S9
Chain O
30S ribosomal protein S10
Chain S
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1791 s