J3_7SSL_046
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAG*CAAC*GUGGGUCGGAGGUUCGAAUCCUCUC
- Length
- 33 nucleotides
- Bulged bases
- 7SSL|1|5|U|8, 7SSL|1|5|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SSL|1|5|G|7
7SSL|1|5|U|8
7SSL|1|5|A|9
7SSL|1|5|G|10
*
7SSL|1|5|C|25
7SSL|1|5|A|26
7SSL|1|5|A|27
7SSL|1|5|C|28
*
7SSL|1|5|G|42
7SSL|1|5|U|43
7SSL|1|5|G|44
7SSL|1|5|G|45
7SSL|1|5|G|46
7SSL|1|5|U|47
7SSL|1|5|C|48
7SSL|1|5|G|49
7SSL|1|5|G|50
7SSL|1|5|A|51
7SSL|1|5|G|52
7SSL|1|5|G|53
7SSL|1|5|U|54
7SSL|1|5|U|55
7SSL|1|5|C|56
7SSL|1|5|G|57
7SSL|1|5|A|58
7SSL|1|5|A|59
7SSL|1|5|U|60
7SSL|1|5|C|61
7SSL|1|5|C|62
7SSL|1|5|U|63
7SSL|1|5|C|64
7SSL|1|5|U|65
7SSL|1|5|C|66
Current chains
- Chain 5
- tRNA Pro
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 8
- Elongation factor G
- Chain e
- 50S ribosomal protein L5
- Chain m
- 50S ribosomal protein L16
Coloring options: