J3_7SSO_004
3D structure
- PDB id
- 7SSO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SSO_004 not in the Motif Atlas
- Homologous match to J3_7RQB_005
- Geometric discrepancy: 0.0944
- The information below is about J3_7RQB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.4
- Basepair signature
- cWW-tSH-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
7SSO|1|1|C|698
7SSO|1|1|A|699
7SSO|1|1|G|700
*
7SSO|1|1|C|732
7SSO|1|1|G|733
7SSO|1|1|A|734
7SSO|1|1|A|735
7SSO|1|1|C|736
*
7SSO|1|1|G|760
7SSO|1|1|A|761
7SSO|1|1|U|762
7SSO|1|1|G|763
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain b
- 50S ribosomal protein L2
Coloring options: