J3_7SSO_022

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

7SSO|1|3|U|1212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SSO_022 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.2542

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7SSO|1|3|C|990
7SSO|1|3|U|991
7SSO|1|3|U|992
7SSO|1|3|G|993
*
7SSO|1|3|C|1045
7SSO|1|3|A|1046
7SSO|1|3|G|1047
*
7SSO|1|3|C|1210
7SSO|1|3|U|1211
7SSO|1|3|U|1212
7SSO|1|3|A|1213
7SSO|1|3|C|1214
7SSO|1|3|G|1215

Current chains

Chain 3

16S rRNA

Nearby chains

Chain S

30S ribosomal protein S14