J3_7SSW_035

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCGUAGC*GCGC*GGAAC

Length

17 nucleotides

Bulged bases

7SSW|1|2|U|14, 7SSW|1|2|A|108

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSW|1|2|G|10
7SSW|1|2|C|11
7SSW|1|2|C|12
7SSW|1|2|G|13
7SSW|1|2|U|14
7SSW|1|2|A|15
7SSW|1|2|G|16
7SSW|1|2|C|17
*
7SSW|1|2|G|67
7SSW|1|2|C|68
7SSW|1|2|G|69
7SSW|1|2|C|70
*
7SSW|1|2|G|106
7SSW|1|2|G|107
7SSW|1|2|A|108
7SSW|1|2|A|109
7SSW|1|2|C|110

Current chains

Chain 2

5S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain o

50S ribosomal protein L18

Chain v

50S ribosomal protein L25

Chain w

50S ribosomal protein L27