3D structure

PDB id
7SSW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Late translocation intermediate with EF-G dissociated (Structure VI)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CCUUAU*AGACUGC*GAGGAAGGUGGGG
Length
26 nucleotides
Bulged bases
7SSW|1|3|U|1183
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SSW|1|3|C|1113
7SSW|1|3|C|1114
7SSW|1|3|U|1115
7SSW|1|3|U|1116
7SSW|1|3|A|1117
7SSW|1|3|U|1118
*
7SSW|1|3|A|1155
7SSW|1|3|G|1156
7SSW|1|3|A|1157
7SSW|1|3|C|1158
7SSW|1|3|U|1159
7SSW|1|3|G|1160
7SSW|1|3|C|1161
*
7SSW|1|3|G|1175
7SSW|1|3|A|1176
7SSW|1|3|G|1177
7SSW|1|3|G|1178
7SSW|1|3|A|1179
7SSW|1|3|A|1180
7SSW|1|3|G|1181
7SSW|1|3|G|1182
7SSW|1|3|U|1183
7SSW|1|3|G|1184
7SSW|1|3|G|1185
7SSW|1|3|G|1186
7SSW|1|3|G|1187

Current chains

Chain 3
16S rRNA

Nearby chains

Chain G
30S ribosomal protein S2
Chain H
30S ribosomal protein S3
Chain L
30S ribosomal protein S7
Chain N
30S ribosomal protein S9
Chain O
30S ribosomal protein S10
Chain S
30S ribosomal protein S14

Coloring options:

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