J3_7ST2_003

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7ST2|1|1|U|686, 7ST2|1|1|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ST2_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0815

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7ST2|1|1|U|683
7ST2|1|1|G|684
7ST2|1|1|A|685
7ST2|1|1|U|686
7ST2|1|1|C|687
7ST2|1|1|U|688
7ST2|1|1|A|689
*
7ST2|1|1|U|773
7ST2|1|1|G|774
7ST2|1|1|G|775
*
7ST2|1|1|C|791
7ST2|1|1|A|792
7ST2|1|1|A|793
7ST2|1|1|A|794

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain b

50S ribosomal protein L2