3D structure

PDB id
7ST2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGAAG*CGCGAUACAG*CGUAC
Length
20 nucleotides
Bulged bases
7ST2|1|1|U|321
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7ST2_029 not in the Motif Atlas
Homologous match to J3_5J7L_068
Geometric discrepancy: 0.0683
The information below is about J3_5J7L_068
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46299.2
Basepair signature
cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
Number of instances in this motif group
3

Unit IDs

7ST2|1|1|G|297
7ST2|1|1|G|298
7ST2|1|1|A|299
7ST2|1|1|A|300
7ST2|1|1|G|301
*
7ST2|1|1|C|316
7ST2|1|1|G|317
7ST2|1|1|C|318
7ST2|1|1|G|319
7ST2|1|1|A|320
7ST2|1|1|U|321
7ST2|1|1|A|322
7ST2|1|1|C|323
7ST2|1|1|A|324
7ST2|1|1|G|325
*
7ST2|1|1|C|337
7ST2|1|1|G|338
7ST2|1|1|U|339
7ST2|1|1|A|340
7ST2|1|1|C|341

Current chains

Chain 1
23S rRNA

Nearby chains

Chain d
50S ribosomal protein L4
Chain u
50S ribosomal protein L24

Coloring options:


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