J3_7SYU_005
3D structure
- PDB id
- 7SYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CCG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7SYU|1|2|C|1138
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SYU|1|2|C|1094
7SYU|1|2|C|1095
7SYU|1|2|G|1096
*
7SYU|1|2|U|1136
7SYU|1|2|U|1137
7SYU|1|2|C|1138
7SYU|1|2|C|1139
7SYU|1|2|G|1140
*
7SYU|1|2|C|1147
7SYU|1|2|A|1148
7SYU|1|2|A|1149
7SYU|1|2|A|1150
7SYU|1|2|G|1151
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein SA
- Chain D
- uS5 (S2)
- Chain W
- 40S ribosomal protein S21
- Chain X
- uS8
- Chain b
- eS26 (S26)
- Chain c
- eS27
Coloring options: