J3_7SYU_015
3D structure
- PDB id
- 7SYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CGUUCUUAG*CGAGAC*GCAAUAACAG
- Length
- 25 nucleotides
- Bulged bases
- 7SYU|1|2|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SYU|1|2|C|1337
7SYU|1|2|G|1338
7SYU|1|2|U|1339
7SYU|1|2|U|1340
7SYU|1|2|C|1341
7SYU|1|2|U|1342
7SYU|1|2|U|1343
7SYU|1|2|A|1344
7SYU|1|2|G|1345
*
7SYU|1|2|C|1384
7SYU|1|2|G|1385
7SYU|1|2|A|1386
7SYU|1|2|G|1387
7SYU|1|2|A|1388
7SYU|1|2|C|1389
*
7SYU|1|2|G|1481
7SYU|1|2|C|1482
7SYU|1|2|A|1483
7SYU|1|2|A|1484
7SYU|1|2|U|1485
7SYU|1|2|A|1486
7SYU|1|2|A|1487
7SYU|1|2|C|1488
7SYU|1|2|A|1489
7SYU|1|2|G|1490
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain D
- uS5 (S2)
- Chain E
- uS3
- Chain R
- uS9
- Chain S
- eS17
- Chain V
- uS10
- Chain e
- eS29
- Chain z
- Internal ribosome entry site; IRES
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