J3_7TM3_023
3D structure
- PDB id
- 7TM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.25 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 7TM3|1|K|C|2470, 7TM3|1|K|A|2472, 7TM3|1|K|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TM3|1|K|A|2451
7TM3|1|K|G|2452
7TM3|1|K|A|2453
7TM3|1|K|U|2454
7TM3|1|K|G|2455
7TM3|1|K|G|2456
*
7TM3|1|K|C|2465
7TM3|1|K|G|2466
7TM3|1|K|U|2467
7TM3|1|K|U|2468
7TM3|1|K|C|2469
7TM3|1|K|C|2470
7TM3|1|K|G|2471
7TM3|1|K|A|2472
7TM3|1|K|A|2473
7TM3|1|K|G|2474
7TM3|1|K|G|2475
7TM3|1|K|G|2476
*
7TM3|1|K|C|2501
7TM3|1|K|A|2502
7TM3|1|K|G|2503
7TM3|1|K|C|2504
7TM3|1|K|C|2505
7TM3|1|K|G|2506
7TM3|1|K|A|2507
7TM3|1|K|U|2508
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein L8
- Chain G
- 60S ribosomal protein L7a
- Chain N
- Ribosomal protein L15
- Chain X
- eL23
- Chain j
- Ribosomal protein L37
- Chain v
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: