J3_7TOP_007
3D structure
- PDB id
- 7TOP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GACG*CGCUAAGG*CAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOP|1|A25S|G|1230
7TOP|1|A25S|A|1231
7TOP|1|A25S|C|1232
7TOP|1|A25S|G|1233
*
7TOP|1|A25S|C|1255
7TOP|1|A25S|G|1256
7TOP|1|A25S|C|1257
7TOP|1|A25S|U|1258
7TOP|1|A25S|A|1259
7TOP|1|A25S|A|1260
7TOP|1|A25S|G|1261
7TOP|1|A25S|G|1262
*
7TOP|1|A25S|C|1277
7TOP|1|A25S|A|1278
7TOP|1|A25S|C|1279
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL12
- Ribosomal protein L12
- Chain ALP0
- 60S acidic ribosomal protein P0
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