J3_7TOR_012
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7TOR|1|A18S|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOR|1|A18S|C|1391
7TOR|1|A18S|U|1392
7TOR|1|A18S|G|1393
7TOR|1|A18S|G|1394
7TOR|1|A18S|C|1395
*
7TOR|1|A18S|G|1450
7TOR|1|A18S|G|1451
7TOR|1|A18S|A|1452
7TOR|1|A18S|C|1453
7TOR|1|A18S|A|1454
7TOR|1|A18S|A|1455
7TOR|1|A18S|G|1456
*
7TOR|1|A18S|C|1470
7TOR|1|A18S|C|1471
7TOR|1|A18S|C|1472
7TOR|1|A18S|G|1473
7TOR|1|A18S|A|1474
7TOR|1|A18S|G|1475
7TOR|1|A18S|A|1476
7TOR|1|A18S|U|1477
7TOR|1|A18S|U|1478
7TOR|1|A18S|G|1479
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain ARAC
- Receptor of activated protein C kinase 1
- Chain AS03
- 40S ribosomal protein S3
- Chain AS05
- Ribosomal protein S5
- Chain AS16
- uS9
- Chain AS17
- 40S ribosomal protein S17
- Chain AS20
- 40S ribosomal protein S20
- Chain AS29
- 40S ribosomal protein S29
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