J3_7TOR_023

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|C|3937
7TOR|1|A28S|G|3938
7TOR|1|A28S|G|3939
*
7TOR|1|A28S|C|4074
7TOR|1|A28S|U|4075
7TOR|1|A28S|G|4076
7TOR|1|A28S|A|4077
7TOR|1|A28S|C|4078
*
7TOR|1|A28S|G|4168
7TOR|1|A28S|G|4169
7TOR|1|A28S|A|4170
7TOR|1|A28S|C|4171
7TOR|1|A28S|A|4172
7TOR|1|A28S|G|4173

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL02

60S ribosomal protein L8

Chain AL08

eL8

Chain AL15

60S ribosomal protein L15