J3_7TOR_027

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

7TOR|1|A28S|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|C|4970
7TOR|1|A28S|A|4971
7TOR|1|A28S|U|4972
*
7TOR|1|A28S|G|4986
7TOR|1|A28S|C|4987
7TOR|1|A28S|U|4988
7TOR|1|A28S|U|4989
7TOR|1|A28S|C|4990
7TOR|1|A28S|U|4991
*
7TOR|1|A28S|A|5060
7TOR|1|A28S|A|5061
7TOR|1|A28S|G|5062
7TOR|1|A28S|G|5063

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL17

60S ribosomal protein L17

Chain AL31

60S ribosomal protein L31