J3_7TUT_003

3D structure

PDB id

7TUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

UCUCC*GCCGG*CCACGCGUCCCCCGCGAG

Length

28 nucleotides

Bulged bases

7TUT|1|K|C|1237, 7TUT|1|K|G|1271, 7TUT|1|K|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TUT|1|K|U|980
7TUT|1|K|C|981
7TUT|1|K|U|982
7TUT|1|K|C|983
7TUT|1|K|C|984
*
7TUT|1|K|G|1070
7TUT|1|K|C|1071
7TUT|1|K|C|1072
7TUT|1|K|G|1073
7TUT|1|K|G|1074
*
7TUT|1|K|C|1236
7TUT|1|K|C|1237
7TUT|1|K|A|1238
7TUT|1|K|C|1239
7TUT|1|K|G|1244
7TUT|1|K|C|1245
7TUT|1|K|G|1246
7TUT|1|K|U|1247
7TUT|1|K|C|1248
7TUT|1|K|C|1249
7TUT|1|K|C|1250
7TUT|1|K|C|1251
7TUT|1|K|C|1252
7TUT|1|K|G|1271
7TUT|1|K|C|1272
7TUT|1|K|G|1273
7TUT|1|K|A|1274
7TUT|1|K|G|1275

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain E

60S ribosomal protein L6

Chain F

60S ribosomal protein L7

Chain b

eL29