3D structure

PDB id
7U0H (explore in PDB, NAKB, or RNA 3D Hub)
Description
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Experimental method
ELECTRON MICROSCOPY
Resolution
2.76 Å

Loop

Sequence
CAGACAUG*UGGG*CAUAAUG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7U0H|1|1|C|435
7U0H|1|1|A|436
7U0H|1|1|G|437
7U0H|1|1|A|438
7U0H|1|1|C|439
7U0H|1|1|A|440
7U0H|1|1|U|441
7U0H|1|1|G|442
*
7U0H|1|1|U|492
7U0H|1|1|G|493
7U0H|1|1|G|494
7U0H|1|1|G|495
*
7U0H|1|1|C|618
7U0H|1|1|A|619
7U0H|1|1|U|620
7U0H|1|1|A|621
7U0H|1|1|A|622
7U0H|1|1|U|623
7U0H|1|1|G|624

Current chains

Chain 1
25S rRNA

Nearby chains

Chain E
60S ribosomal protein L6-A
Chain P
60S ribosomal protein L17-A
Chain e
60S ribosomal protein L32
Chain f
60S ribosomal protein L33-A

Coloring options:

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